Publications
2022
Carvelli A., Setti A., Desideri F., Galfre S.G., Biscarini S., Santini T., Colantoni A., Peruzzi G., Marzi M.J., Capauto D., Di Angelantonio S., Ballarino M., Nicassio F., Laneve P., Bozzoni I.
A multifunctional locus controls motor neuron differentiation through short and long noncoding RNAs
EMBO Journal, vol. 41, (no. 13)
2022
Biagioni F., Croci O., Sberna S., Donato E., Sabo A., Bisso A., Curti L., Chiesa A., Campaner S.
Decoding YAP dependent transcription in the liver
Nucleic Acids Research, vol. 50, (no. 14), pp. 7959-7971
2022
Tiberti S., Catozzi C., Croci O., Ballerini M., Cagnina D., Soriani C., Scirgolea C., Gong Z., He J., Macandog A.D., Nabinejad A., Nava Lauson C.B., Quinte' A., Bertalot G., Petz W.L., Ravenda S.P., Licursi V., Paci P., Rasponi M., Rotta L., Fazio N., Ren G., Fumagalli-Romario U., Schaefer M.H., Campaner S., Lugli E., Nezi L., Manzo T.
GZMKhigh CD8+ T effector memory cells are associated with CD15high neutrophil abundance in non-metastatic colorectal tumors and predict poor clinical outcome
Nature Communications, vol. 13, (no. 1)
2022
Tordonato C., Marzi M.J., Di Fiore P.P., Nicassio F.
microRNAs transcriptional profiling of mammary stem cells isolated by PKH26 staining and FACS sorting
Methods in Cell Biology, vol. 170, pp. 59-79
Book Chapter
Book Series
2022
Ugolini C., Mulroney L., Leger A., Castelli M., Criscuolo E., Williamson M.K., Davidson A.D., Almuqrin A., Giambruno R., Jain M., Frigè G., Olsen H., Tzertzinis G., Schildkraut I., Wulf M.G., Corrêa I.R., Ettwiller L., Clementi N., Clementi M., Mancini N., Birney E., Akeson M., Nicassio F., Matthews D.A., Leonardi T.
Nanopore ReCappable sequencing maps SARS-CoV-2 5' capping sites and provides new insights into the structure of sgRNAs
Nucleic Acids Research
2022
Brancato V., Brentari I., Coscujuela Tarrero L., Furlan M., Nicassio F., Denti M.A.
News from around the RNA world: new avenues in RNA biology, biotechnology and therapeutics from the 2022 SIBBM meeting
Biology Open, vol. 11, (no. 10)
2022
Simeone I., Rubolino C., Noviello T.M.R., Farinello D., Cerulo L., Marzi M.J., Nicassio F.
Prediction and pan-cancer analysis of mammalian transcripts involved in target directed miRNA degradation
Nucleic Acids Research, vol. 50, (no. 4), pp. 2019-2035
2022
Giambruno R., Nicassio F.
Proximity-dependent biotinylation technologies for mapping RNA-protein interactions in live cells
Frontiers in Molecular Biosciences
2022
Maestri S., Grosso V., Alfano M., Lavezzari D., Piubelli C., Bisoffi Z., Rossato M., Delledonne M.
STArS (STrain-Amplicon-Seq), a targeted Nanopore sequencing workflow for SARS-CoV-2 diagnostics and genotyping
Biology Methods and Protocols, vol. bpac020
2022
Kim K.M., Mura-Meszaros A., Tollot M., Krishnan M.S., Grundl M., Neubert L., Groth M., Rodriguez-Fraticelli A., Svendsen A.F., Campaner S., Andreas N., Kamradt T., Hoffmann S., Camargo F.D., Heidel F.H., Bystrykh L.V., de Haan G., von Eyss B.
Taz protects hematopoietic stem cells from an aging-dependent decrease in PU.1 activity
Nature Communications, vol. 13, (no. 1)
2021
Savorani C., Malinverno M., Seccia R., Maderna C., Giannotta M., Terreran L., Mastrapasqua E., Campaner S., Dejana E., Giampietro C.
A dual role of YAP in driving TGFβ-mediated endothelial-to-mesenchymal transition
Journal of Cell Science, vol. 134, (no. 15)
2021
Bido S., Muggeo S., Massimino L., Marzi M.J., Giannelli S.G., Melacini E., Nannoni M., Gambare D., Bellini E., Ordazzo G., Rossi G., Maffezzini C., Iannelli A., Luoni M., Bacigaluppi M., Gregori S., Nicassio F., Broccoli V.
Author Correction: Microglia-specific overexpression of α-synuclein leads to severe dopaminergic neurodegeneration by phagocytic exhaustion and oxidative toxicity (Nature Communications, (2021), 12, 1, (6237), 10.1038/s41467-021-26519-x)
Nature Communications, vol. 12, (no. 1)
2021
Furlan M., Delgado-Tejedor A., Mulroney L., Pelizzola M., Novoa E.M., Leonardi T.
Computational methods for RNA modification detection from nanopore direct RNA sequencing data
RNA Biology, vol. 18, (no. S1), pp. 31-40
2021
Lopez-Hernandez A., Sberna S., Campaner S.
Emerging principles in the transcriptional control by YAP and TAZ
Cancers, vol. 13, (no. 16)
2021
Zoma M., Curti L., Shinde D., Albino D., Mitra A., Sgrignani J., Mapelli S.N., Sandrini G., Civenni G., Merulla J., Chiorino G., Kunderfranco P., Cacciatore A., Kokanovic A., Rinaldi A., Cavalli A., Catapano C.V., Carbone G.M.
EZH2-induced lysine K362 methylation enhances TMPRSS2-ERG oncogenic activity in prostate cancer
Nature Communications, vol. 12, (no. 1)