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Mattia Pelizzola

Istituto Italiano di Tecnologia

I am a computational biologist with background in biotechnology, interested in computational and experimental (epi)genomics. I lead a research group studying how co- and post- transcriptional events shape gene expression programs, through an interdisciplinary approach combining cutting edge experimental and computational methods (https://www.iit.it/it/web/genomic-science/pelizzola).


Title: PhD in Complexity in Post-Genomic Biology
Institute: University of Torino
Location: Torino
Country: Italy
From: 2004 To: 2006

Title: Master in Bioinformatics
Institute: Milano-Bicocca University
Location: Milano
Country: Italy
From: 2002 To: 2003

Title: Master’s degree in Industrial Biotechnologies
Institute: Milano-Bicocca University
Location: Milano
Country: Italy
From: 1995 To: 2001

Experience External

Title: Postdoctoral Research Associate
Institute: Salk Institute for Biological Science
Location: La Jolla, CA
Country: USA
From: 2009 To: 2011

Title: Postdoctoral Research Associate
Institute: Yale University
Location: New Haven , CT
Country: USA
From: 2007 To: 2009

Top Publications
Furlan M., de Pretis S., Pelizzola M.
Dynamics of transcriptional and post-transcriptional regulation
Briefings in Bioinformatics
Furlan M., Galeota E., Del Gaudio N., Dassi E., Caselle M., de Pretis S., Pelizzola M.
Genome-wide dynamics of RNA synthesis, processing and degradation without RNA metabolic labeling
Genome Research
De Pretis S., Kress T.R., Morelli M.J., Sabo A., Locarno C., Verrecchia A., Doni M., Campaner S., Amati B., Pelizzola M.
Integrative analysis of RNA polymerase II and transcriptional dynamics upon MYC activation
Genome Research, vol. 27, (no. 10), pp. 1658-1664
Galeota E., Pelizzola M.
Ontology-based annotations and semantic relations in large-scale (epi)genomics data
Briefings in Bioinformatics, vol. 18, (no. 3), pp. 403-412
De Pretis S., Kress T., Morelli M.J., Melloni G.E.M., Riva L., Amati B., Pelizzola M.
INSPEcT: A computational tool to infer mRNA synthesis, processing and degradation dynamics from RNA- and 4sU-seq time course experiments
Bioinformatics, vol. 31, (no. 17), pp. 2829-2835
All Publications
Furlan M., Delgado-Tejedor A., Mulroney L., Pelizzola M., Novoa E.M., Leonardi T.
Computational methods for RNA modification detection from nanopore direct RNA sequencing data
RNA Biology
de Pretis S., Furlan M., Pelizzola M.
Identification of Genes Post-Transcriptionally Regulated from RNA-seq: The Case Study of Liver Hepatocellular Carcinoma
Methods in molecular biology (Clifton, N.J.), vol. 2284, pp. 271-287
Book Chapter Book Series
Leone M., Galeota E., Masseroli M., Pelizzola M.
Identification, semantic annotation and comparison of combinations of functional elements in multiple biological conditions
Ianniello Z., Sorci M., Ginistrelli L.C., Iaiza A., Marchioni M., Tito C., Capuano E., Masciarelli S., Ottone T., Attrotto C., Rizzo M., Franceschini L., de Pretis S., Voso M.T., Pelizzola M., Fazi F., Fatica A.
New insight into the catalytic -dependent and -independent roles of METTL3 in sustaining aberrant translation in chronic myeloid leukemia
Cell Death & Disease
Biasini A., Abdulkarim B., de Pretis S., Tan J.Y., Arora R., Wischnewski H., Dreos R., Pelizzola M., Ciaudo C., Marques A.C.
Translation is required for miRNA-dependent decay of endogenous transcripts
EMBO Journal, vol. 40, (no. 3)