Publications
2024
Barcenas-Walls J.R., Ansaloni F., Herve B., Strandback E., Nyman T., Castelo-Branco G., Bartosovic M.
Nano-CUT&Tag for multimodal chromatin profiling at single-cell resolution
Nature Protocols, vol. 19, (no. 3), pp. 791-830
2024
Jimenez-Gonzalez A., Ansaloni F., Nebendahl C., Alavioon G., Murray D., Robak W., Sanges R., Muller F., Immler S.
Paternal starvation affects metabolic gene expression during zebrafish offspring development and lifelong fitness
Molecular Ecology, vol. 33, (no. 6)
2023
Ansaloni F., Gustincich S., Sanges R.
In silico characterisation of minor wave genes and LINE-1s transcriptional dynamics at murine zygotic genome activation
Frontiers in Cell and Developmental Biology, vol. 11
2023
D'Agostino S., Tettey M. A., Volpe M., Pierattini B., Ansaloni F., Lau P., Bon C., Peruzzo O., Braccia C., Armirotti A., Scarpato M., Damiani D., Di Carlo V., Carninci P., Santoro C., Persichetti F., Pandolfini L., Espinoza S., Zucchelli S., Sanges R., Gustincich S.
Internal Ribosome Entry Site RNAs act in trans through an antisense sequence in linear and circular non-coding RNAs
bioRxiv
2023
Mangoni D., Simi A., Lau P., Armaos A., Ansaloni F., Codino A., Damiani D., Floreani L., Di Carlo V., Vozzi D., Persichetti F., Santoro C., Pandolfini L., Tartaglia G.G., Sanges R., Gustincich S.
LINE-1 regulates cortical development by acting as long non-coding RNAs
Nature Communications, vol. 14, (no. 1)
2023
Hadzhiev Y., Wheatley L., Cooper L., Ansaloni F., Whalley C., Chen Z., Finaurini S., Gustincich S., Sanges R., Burgess S., Beggs A., Muller F.
The miR-430 locus with extreme promoter density forms a transcription body during the minor wave of zygotic genome activation
Developmental Cell, vol. 58, (no. 2), pp. 155-170.e8
2023
Simi A., Ansaloni F., Damiani D., Codino A., Mangoni D., Lau P., Vozzi D., Pandolfini L., Sanges R., Gustincich S.
The Pgbd5 DNA transposase is required for mouse cerebral cortex development through DNA double-strand breaks formation
bioRxiv
Article
E-print Archive
2022
Floreani L., Ansaloni F., Mangoni D., Agostoni E., Sanges R., Persichetti F., Gustincich S.
Analysis of LINE1 Retrotransposons in Huntington’s Disease
Frontiers in Cellular Neuroscience, vol. 15
2022
Petrosino G., Ponte G., Volpe M., Zarrella I., Ansaloni F., Langella C., Di Cristina G., Finaurini S., Russo M.T., Basu S., Musacchia F., Ristoratore F., Pavlinic D., Benes V., Ferrante M.I., Albertin C., Simakov O., Gustincich S., Fiorito G., Sanges R.
Identification of LINE retrotransposons and long non-coding RNAs expressed in the octopus brain
BMC Biology, vol. 20, (no. 1)
2022
Gualandi N., Iperi C., Esposito M., Ansaloni F., Gustincich S., Sanges R.
Meta‐Analysis Suggests That Intron Retention Can Affect Quantification of Transposable Elements from RNA‐Seq Data
Biology, vol. 11, (no. 6)
2022
Ansaloni F., Gualandi N., Esposito M., Gustincich S., Sanges R.
TEspeX: consensus-specific quantification of transposable element expression preventing biases from exonized fragments
Bioinformatics, vol. 38, (no. 18), pp. 4430-4433
2022
Casale A.M., Liguori F., Ansaloni F., Cappucci U., Finaurini S., Spirito G., Persichetti F., Sanges R., Gustincich S., Piacentini L.
Transposable element activation promotes neurodegeneration in a Drosophila model of Huntington's disease
iScience, vol. 25, (no. 1)
2022
Esposito M., Gualandi N., Spirito G., Ansaloni F., Gustincich S., Sanges R.
Transposons Acting as Competitive Endogenous RNAs: In-Silico Evidence from Datasets Characterised by L1 Overexpression
Biomedicines, vol. 10, (no. 12)
2021
Ansaloni F., Gerdol M., Torboli V., Fornaini N.R., Greco S., Giulianini P.G., Coscia M.R., Miccoli A., Santovito G., Buonocore F., Scapigliati G., Pallavicini A.
Cold adaptation in antarctic notothenioids: Comparative transcriptomics reveals novel insights in the peculiar role of gills and highlights signatures of cobalamin deficiency
International Journal of Molecular Sciences, vol. 22, (no. 4), pp. 1-22
2021
Napoletano F., Ferrari Bravo G., Voto I.A.P., Santin A., Celora L., Campaner E., Dezi C., Bertossi A., Valentino E., Santorsola M., Rustighi A., Fajner V., Maspero E., Ansaloni F., Cancila V., Valenti C.F., Santo M., Artimagnella O.B., Finaurini S., Gioia U., Polo S., Sanges R., Tripodo C., Mallamaci A., Gustincich S., d'Adda di Fagagna F., Mantovani F., Specchia V., Del Sal G.
The prolyl-isomerase PIN1 is essential for nuclear Lamin-B structure and function and protects heterochromatin under mechanical stress
Cell Reports, vol. 36, (no. 11)